IGVFFI3143UHIU

released

validated

File Set

IGVFDS5448FWBW(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)

Summary

cell by gene in raw feature barcode matrix

Analysis Step Version

/analysis-step-versions/072beaf9-db5c-4bb3-9d63-e5cf7ee29dd6/

File Format

hdf5

Content Type

raw feature barcode matrix

Content Summary

cell by gene in raw feature barcode matrix

Aliases

ansuman-satpathy:igvf0_raw_rna_counts_10x1

md5sum

1dd74e3eb4564362d01ac0df85bec162

File Size

168 MB

Submitted File Name

/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf0/e0l1_raw_feature_bc_matrix.h5

Checkfiles Version

v14

Matrix Details

Principal Dimension

cell

Secondary Dimensions

gene

File Format Specifications

1 item

Page

Description

Type

Download

Preview

Raw RNA count matrix definition for 10x multiome

file format specification

raw_rna_count_marix_format.pdf

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2682GVVD

MultiplexedSample

GM25256 (WTC-11)

multiplexed sample: GM25256 (WTC-11) differentiated cell specimen induced to endothelial cell for 3 days, male, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to endothelial cell for 4 days, male, Homo sapiens; ... and 21 more samples