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IGVFFI2733DASR

released
validated
File Set
IGVFDS6435ALNY(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
cell by gene in raw feature barcode matrix
Analysis Step Version
/analysis-step-versions/072beaf9-db5c-4bb3-9d63-e5cf7ee29dd6/
File Format
hdf5
Content Type
raw feature barcode matrix
Content Summary
cell by gene in raw feature barcode matrix
Aliases
ansuman-satpathy:igvf9_raw_rna_counts_10x2
md5sum
1c263f35ae013777352ff154fb15626a
File Size
218 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf9/e9l2_raw_feature_bc_matrix.h5
Checkfiles Version
v14

Matrix Details

Principal Dimension
cell
Secondary Dimensions
gene

File Format Specifications

1 item
Page
Description
Type
Download
Preview
Raw RNA count matrix definition for 10x multiome
file format specification

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 1 day; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 5 days; ... and 5 more samples

Files This File Derives From

12 items
fastq
reads
Ansuman Satpathy, Stanford
1.4 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.3 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
5.3 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.3 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.3 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
12 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
5.5 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
5.5 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
12 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.3 GB
validated

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Ansuman Satpathy, Stanford