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INDEXED
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IGVFFI9631IBXG
IGVFFI9631IBXG
released
validated
Json view
File Set
IGVFDS3015HARC
(single-nucleus ATAC-seq (10x multiome))
Summary
seqspec of IGVFFI1447PQPF, IGVFFI6947ZSMT, IGVFFI7817JYCA, IGVFFI5857WLSI
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_mouse_bridge_113_atac
md5sum
6bfaf0b42bf17c7528804e0e55c39dc0
Content MD5sum
683810a3090759a7ef4d02d9847168ad
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_mouse_bridge_113_atac_atac_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1447PQPF
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
HV7LKDSX5
1
8.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5857WLSI
fastq
reads
1
Illumina NovaSeq 6000
HV7LKDSX5
1
3.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6947ZSMT
fastq
reads
1
Read 1
Illumina NovaSeq 6000
HV7LKDSX5
1
26 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7817JYCA
fastq
reads
1
Read 2
Illumina NovaSeq 6000
HV7LKDSX5
1
28 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5224XSCM
Tissue
left cerebral cortex
left cerebral cortex tissue, male, Mus musculus C57BL/6J (10 weeks)
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford