IGVFFI9631IBXG

{
    "@context": "/terms/",
    "@id": "/configuration-files/IGVFFI9631IBXG/",
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        "Item"
    ],
    "accession": "IGVFFI9631IBXG",
    "aliases": [
        "ansuman-satpathy:seqspec_igvf_mouse_bridge_113_atac"
    ],
    "assay_titles": [
        "10x multiome"
    ],
    "audit": {},
    "award": {
        "@id": "/awards/HG012076/",
        "component": "mapping"
    },
    "checkfiles_version": "v16",
    "content_md5sum": "683810a3090759a7ef4d02d9847168ad",
    "content_type": "seqspec",
    "creation_timestamp": "2024-09-18T02:45:46.058423+00:00",
    "file_format": "yaml",
    "file_set": {
        "@id": "/measurement-sets/IGVFDS3015HARC/",
        "accession": "IGVFDS3015HARC",
        "file_set_type": "experimental data",
        "samples": [
            {
                "@id": "/tissues/IGVFSM5224XSCM/",
                "accession": "IGVFSM5224XSCM",
                "classifications": [
                    "tissue"
                ],
                "sample_terms": [
                    {
                        "@id": "/sample-terms/NTR_0000646/",
                        "status": "released",
                        "term_name": "left cerebral cortex"
                    }
                ],
                "status": "released",
                "summary": "left cerebral cortex tissue, male, Mus musculus C57BL/6J (10 weeks)",
                "taxa": "Mus musculus"
            }
        ],
        "status": "released",
        "summary": "single-nucleus ATAC-seq (10x multiome)"
    },
    "file_size": 1383,
    "gene_list_for": [],
    "href": "/configuration-files/IGVFFI9631IBXG/@@download/IGVFFI9631IBXG.yaml.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/ansuman-satpathy/",
        "title": "Ansuman Satpathy, Stanford"
    },
    "loci_list_for": [],
    "md5sum": "6bfaf0b42bf17c7528804e0e55c39dc0",
    "quality_metrics": [],
    "release_timestamp": "2025-03-07T01:18:46.481431+00:00",
    "s3_uri": "s3://igvf-files/2024/09/18/fa405963-295e-4acc-8f0e-6d16ee31499a/IGVFFI9631IBXG.yaml.gz",
    "schema_version": "7",
    "seqspec_of": [
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        "/sequence-files/IGVFFI6947ZSMT/",
        "/sequence-files/IGVFFI7817JYCA/",
        "/sequence-files/IGVFFI5857WLSI/"
    ],
    "status": "released",
    "submitted_by": {
        "@id": "/users/353655bc-31a1-4cd9-bac3-c7d34faf722f/",
        "title": "Christopher Mcginnis"
    },
    "submitted_file_name": "/home/users/cmcginni/igvf_utils_out/seqspec/igvf_mouse_bridge_113_atac_atac_seqspec.yaml.gz",
    "summary": "seqspec of IGVFFI1447PQPF, IGVFFI6947ZSMT, IGVFFI7817JYCA, IGVFFI5857WLSI",
    "upload_status": "validated",
    "uuid": "fa405963-295e-4acc-8f0e-6d16ee31499a",
    "validate_onlist_files": true
}