IGVF

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4420 items

ConfigurationFile
IGVFFI0043GRDH
yaml - seqspec
Ali Mortazavi, UCI
MeasurementSe
Parse SPLiT-seq
Seqspec Of
IGVFFI3555UMLA, IGVFFI2003XTIS
released
validated
ConfigurationFile
IGVFFI9858YEUZ
yaml - seqspec
Ansuman Satpathy, Stanford
MeasurementSe
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
Seqspec Of
IGVFFI1447EBOP, IGVFFI4191ALPR, IGVFFI7787TNYR, IGVFFI5693RHUR
released
validated
ConfigurationFile
IGVFFI0714JZHN
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI7933GDFA, IGVFFI4781THSS, IGVFFI6491GFUH
released
validated
ConfigurationFile
IGVFFI7248KXML
yaml - seqspec
Jesse Engreitz, Stanford
MeasurementSe
mixed CRISPR FlowFISH screen sorted on the expression of CCND1 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI8964HZGC
released
validation exempted
ConfigurationFile
IGVFFI7680SNIT
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI2146BGMX, IGVFFI5127BGBK, IGVFFI2210VNKC
released
validated
ConfigurationFile
IGVFFI8396XQYA
yaml - seqspec
Leif Ludwig, MDC
MeasurementSe
10x multiome with scMito-seq
Seqspec Of
IGVFFI8406WWCD, IGVFFI0037VKZN
preview
validated
ConfigurationFile
IGVFFI3246HBWS
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI1594DTQU, IGVFFI7689QRJA, IGVFFI5511BLXV
released
validated
ConfigurationFile
IGVFFI9810ZIQO
yaml - seqspec
Ansuman Satpathy, Stanford
MeasurementSe
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
Seqspec Of
IGVFFI2029TAMT, IGVFFI2989EVRF, IGVFFI5653UGYL, IGVFFI0807IMSL
released
validated
ConfigurationFile
IGVFFI0714MTNO
yaml - seqspec
Jesse Engreitz, Stanford
MeasurementSe
mixed CRISPR FlowFISH screen sorted on the expression of ITPRID2 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI1411ZGTO
released
validation exempted
ConfigurationFile
IGVFFI8240YUYH
yaml - seqspec
Jay Shendure, UW
MeasurementSe
scATAC-seq
Seqspec Of
IGVFFI8821SFDV, IGVFFI4136YACE, IGVFFI0014UJDI, IGVFFI2437FQNY
released
validated
ConfigurationFile
IGVFFI6280LJML
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI5086EZBO, IGVFFI1592EFKY, IGVFFI0077QETR
released
validated
ConfigurationFile
IGVFFI8969XVTD
yaml - seqspec
Jesse Engreitz, Stanford
MeasurementSe
mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI0721XHEB
released
validation exempted
ConfigurationFile
IGVFFI8642STFL
yaml - seqspec
Ansuman Satpathy, Stanford
AuxiliarySe
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
Seqspec Of
IGVFFI1362SMCP, IGVFFI9766RAEA, IGVFFI4070VQSK, IGVFFI2708QCRU
released
validated
ConfigurationFile
IGVFFI2176XDAD
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI0221RCBJ, IGVFFI3489WGJG, IGVFFI6650KRFI
released
validated
ConfigurationFile
IGVFFI4325KHUA
yaml - seqspec
Jesse Engreitz, Stanford
MeasurementSe
mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI1717GCIU
released
validation exempted
ConfigurationFile
IGVFFI6066UBCS
yaml - seqspec
Ali Mortazavi, UCI
MeasurementSe
Parse SPLiT-seq
Seqspec Of
IGVFFI5292GFID, IGVFFI0203CXPO
released
validated
ConfigurationFile
IGVFFI8434GZVS
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI0834JPDB, IGVFFI3076YHET, IGVFFI3889YAQJ
released
validated
ConfigurationFile
IGVFFI3489YTUF
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI8564XKWT, IGVFFI9625VOBC, IGVFFI5125ZOLL
released
validated
ConfigurationFile
IGVFFI8212FHGM
yaml - seqspec
Jesse Engreitz, Stanford
MeasurementSe
mixed CRISPR FlowFISH screen sorted on the expression of MYC integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI2912HULO
released
validation exempted
ConfigurationFile
IGVFFI9241RRZV
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI4653IBZO, IGVFFI3278EOPV, IGVFFI0538MARB
released
validated
ConfigurationFile
IGVFFI4227NHQH
yaml - seqspec
Jesse Engreitz, Stanford
MeasurementSe
mixed CRISPR FlowFISH screen sorted on the expression of CCND1 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI3169FYVS
released
validation exempted
ConfigurationFile
IGVFFI4350SSTY
yaml - seqspec
Ali Mortazavi, UCI
MeasurementSe
Parse SPLiT-seq
Seqspec Of
IGVFFI7619YQYV, IGVFFI0811JMNQ
released
validated
ConfigurationFile
IGVFFI5277KTGH
yaml - seqspec
Ansuman Satpathy, Stanford
MeasurementSe
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
Seqspec Of
IGVFFI5887WXJN, IGVFFI9700OSNI, IGVFFI7961ZCVK, IGVFFI8562KVTJ
released
validated
ConfigurationFile
IGVFFI1770OEWX
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell RNA sequencing assay (SHARE-seq)
Seqspec Of
IGVFFI0352ENLP, IGVFFI7926BMKR
released
validated
ConfigurationFile
IGVFFI6827RBKC
yaml - seqspec
Jason Buenrostro, Broad
MeasurementSe
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI8547GVDU, IGVFFI4777NCDL, IGVFFI8754ODAL
released
validated

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