IGVF

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1984 items

ConfigurationFile
IGVFFI9858YEUZ
yaml - seqspec
Ansuman Satpathy, Stanford
File Set
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
Seqspec Of
IGVFFI1447EBOP, IGVFFI4191ALPR, IGVFFI7787TNYR, IGVFFI5693RHUR
released
validated
ConfigurationFile
IGVFFI7248KXML
yaml - seqspec
Jesse Engreitz, Stanford
File Set
mixed CRISPR FlowFISH screen sorted on the expression of CCND1 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI8964HZGC
released
validation exempted
ConfigurationFile
IGVFFI8396XQYA
yaml - seqspec
Leif Ludwig, MDC
File Set
10x multiome with scMito-seq
Seqspec Of
IGVFFI8406WWCD, IGVFFI0037VKZN
preview
validated
ConfigurationFile
IGVFFI9810ZIQO
yaml - seqspec
Ansuman Satpathy, Stanford
File Set
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
Seqspec Of
IGVFFI2029TAMT, IGVFFI2989EVRF, IGVFFI5653UGYL, IGVFFI0807IMSL
released
validated
ConfigurationFile
IGVFFI0714MTNO
yaml - seqspec
Jesse Engreitz, Stanford
File Set
mixed CRISPR FlowFISH screen sorted on the expression of ITPRID2 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI1411ZGTO
released
validation exempted
ConfigurationFile
IGVFFI8240YUYH
yaml - seqspec
Jay Shendure, UW
File Set
scATAC-seq
Seqspec Of
IGVFFI8821SFDV, IGVFFI4136YACE, IGVFFI0014UJDI, IGVFFI2437FQNY
released
validated
ConfigurationFile
IGVFFI8969XVTD
yaml - seqspec
Jesse Engreitz, Stanford
File Set
mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI0721XHEB
released
validation exempted
ConfigurationFile
IGVFFI8642STFL
yaml - seqspec
Ansuman Satpathy, Stanford
File Set
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
Seqspec Of
IGVFFI1362SMCP, IGVFFI9766RAEA, IGVFFI4070VQSK, IGVFFI2708QCRU
released
validated
ConfigurationFile
IGVFFI4325KHUA
yaml - seqspec
Jesse Engreitz, Stanford
File Set
mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI1717GCIU
released
validation exempted
ConfigurationFile
IGVFFI8212FHGM
yaml - seqspec
Jesse Engreitz, Stanford
File Set
mixed CRISPR FlowFISH screen sorted on the expression of MYC integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI2912HULO
released
validation exempted
ConfigurationFile
IGVFFI4227NHQH
yaml - seqspec
Jesse Engreitz, Stanford
File Set
mixed CRISPR FlowFISH screen sorted on the expression of CCND1 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI3169FYVS
released
validation exempted
ConfigurationFile
IGVFFI5277KTGH
yaml - seqspec
Ansuman Satpathy, Stanford
File Set
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
Seqspec Of
IGVFFI5887WXJN, IGVFFI9700OSNI, IGVFFI7961ZCVK, IGVFFI8562KVTJ
released
validated
ConfigurationFile
IGVFFI5301LVOU
yaml - seqspec
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci
Seqspec Of
IGVFFI7212KPPW, IGVFFI7745NNEZ, IGVFFI8620YJXA
released
validation exempted
ConfigurationFile
IGVFFI0331EHQR
yaml - seqspec
Jason Buenrostro, Broad
File Set
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI1625RYZQ, IGVFFI7512KRYI, IGVFFI0602TOGB
released
validated
ConfigurationFile
IGVFFI1277NHCZ
yaml - seqspec
Jesse Engreitz, Stanford
File Set
mixed CRISPR FlowFISH screen sorted on the expression of MYC integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI4334TLKF
released
validation exempted
ConfigurationFile
IGVFFI5281WWCV
yaml - seqspec
Leif Ludwig, MDC
File Set
10x multiome with scMito-seq
Seqspec Of
IGVFFI4885JUHO, IGVFFI8058CEIA, IGVFFI7140GTVV
preview
validated
ConfigurationFile
IGVFFI6953RQCU
yaml - seqspec
Jesse Engreitz, Stanford
File Set
mixed CRISPR FlowFISH screen sorted on the expression of MYC integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI0779HVAM
released
validation exempted
ConfigurationFile
IGVFFI7954UIUN
yaml - seqspec
Charles Gersbach, Duke
File Set
gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting transcription start sites in 24 genes
Seqspec Of
IGVFFI5492CFOS, IGVFFI3480BTJU
released
validation exempted
ConfigurationFile
IGVFFI9276QSJE
yaml - seqspec
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci
Seqspec Of
IGVFFI2373VGQQ, IGVFFI6523ECXR, IGVFFI5632DOTG
released
validation exempted
ConfigurationFile
IGVFFI5264TNUW
yaml - seqspec
Jason Buenrostro, Broad
File Set
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI0157MFIS, IGVFFI9951VBJS
released
validated
ConfigurationFile
IGVFFI6044TRRB
yaml - seqspec
Jason Buenrostro, Broad
File Set
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI3368XUML, IGVFFI6943YYXC
released
validated
ConfigurationFile
IGVFFI1367YZPA
yaml - seqspec
Jesse Engreitz, Stanford
File Set
mixed CRISPR FlowFISH screen sorted on the expression of ITPRID2 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Seqspec Of
IGVFFI1256JDZP
released
validation exempted
ConfigurationFile
IGVFFI3677HPJG
yaml - seqspec
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci
Seqspec Of
IGVFFI2315CHAW, IGVFFI6297ZONU, IGVFFI1413KOZF
released
validation exempted
ConfigurationFile
IGVFFI9435UFOD
yaml - seqspec
Jason Buenrostro, Broad
File Set
single-cell ATAC-seq (SHARE-seq)
Seqspec Of
IGVFFI8305JJZD, IGVFFI1456HVZR
released
validated
ConfigurationFile
IGVFFI4192IQLB
yaml - seqspec
Ansuman Satpathy, Stanford
File Set
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
Seqspec Of
IGVFFI9161IXWC, IGVFFI7056KQRJ, IGVFFI5875NOXD, IGVFFI6848CISU
released
validated