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IGVFFI8205LBRH

released
validated
File Set
IGVFDS4863BMGZ(scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI0072NENY, IGVFFI3105RHFR, IGVFFI5106LXXU
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_K562_VP64_10Xlane1_seqlane1_exprs_seqspec
md5sum
11e15f990a56e9019a9223c74f8c8295
Content MD5sum
2b9f15eb912949a24e9c67be260f47a2
File Size
1.3 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS4863BMGZ_1_exprs_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

3 items
Read Names
fastq
reads
1
AAAHG2HHV
1
812 MB
Jay Shendure, UW
validated
fastq
reads
1
Read 1
AAAHG2HHV
1
2.7 GB
Jay Shendure, UW
validated
fastq
reads
1
Read 2
AAAHG2HHV
1
5.8 GB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) K562 cell line (cellular sub pool: 10Xlane1) modified with CRISPRa Sp-dCas9-VP64, transfected with a guide library