Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI6533YMOZ
IGVFFI6533YMOZ
released
validated
Json view
File Set
IGVFDS6819TPGN
(single-nucleus ATAC-seq (10x multiome))
Summary
seqspec of IGVFFI3352IPEU, IGVFFI0305RRIM, IGVFFI0814SBBP, IGVFFI8084WUEK
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_mouse_bridge_101_atac
md5sum
457d5f22266372ab56346c04bf1b2f97
Content MD5sum
b96fed81f43caae4ab9842023f97a891
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_mouse_bridge_101_atac_atac_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0305RRIM
fastq
reads
1
Read 1
Illumina NovaSeq 6000
HV7LKDSX5
1
18 GB
Ansuman Satpathy, Stanford
validated
IGVFFI0814SBBP
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
HV7LKDSX5
1
6.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3352IPEU
fastq
reads
1
Illumina NovaSeq 6000
HV7LKDSX5
1
2.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8084WUEK
fastq
reads
1
Read 2
Illumina NovaSeq 6000
HV7LKDSX5
1
19 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2776DDRF
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male, 10 weeks) left cerebral cortex tissue