Home

IGVFFI5181NANQ

released
validated
File Set
IGVFDS6521MNHG(lipid-conjugated oligo sequencing for interference single-nucleus ATAC-seq (10x multiome with MULTI-seq), interference single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI2629AQFQ, IGVFFI6476FJVC, IGVFFI6133ZBWA, IGVFFI6902ZMDQ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp10_multi_10x2_NGS1
md5sum
f5c6f683e3308386b6900cc088fb9224
Content MD5sum
9121b92640a00be6a419b5a4adefe4b7
File Size
1.3 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp10_multi_10x2_NGS1_multi_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford

seqspec File Of

4 items
Read Names
fastq
reads
1
223JHYLT3
4
163 MB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
223JHYLT3
4
547 MB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
223JHYLT3
4
1.2 GB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
223JHYLT3
4
216 MB
Ansuman Satpathy, Stanford
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) Jurkat cell line treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; Homo sapiens (female) K562 cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples