IGVFFI5045HRAK

released
validation exempted
File Set
IGVFDS5798HAUC(quantification DNA barcode sequencing for lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide)
Summary
seqspec of IGVFFI0745BZJW, IGVFFI3315BUYG, IGVFFI8699ZPZT, IGVFFI8821TPBU, IGVFFI8978OOBC, IGVFFI4744IBKS, IGVFFI3494FIPR, IGVFFI7895RSMK, IGVFFI3917RLFW, IGVFFI6204YNLN, IGVFFI7646DGAU, IGVFFI6913ZHZQ
File Format
yaml
Content Type
seqspec
md5sum
ead2692615e737e8ecc96b97b897ee39
Content MD5sum
37af261977b50302b1bf801e31e9ff52
File Size
1.8 KB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/count/seqspec/IGVF_shendure_progReg_HEK293T_count_rep2_dna.yaml.gz"
Checkfiles Version
No version due to exemption
Submitter Comment
"This file was previously validated by legacy checkfiles and is seqspec v0.3.0. It is now local checkfiles V17 validated, patched to be validation exempted as a part of portal-wide seqspec updating effort."
Attribution

seqspec File Of

12 items
Read Names
fastq
reads
3
Barcode forward
875 MB
Nadav Ahituv, UCSF
validated
fastq
reads
3
UMI
936 MB
Nadav Ahituv, UCSF
validated
fastq
reads
5
Barcode forward
21 MB
Nadav Ahituv, UCSF
validated
fastq
reads
5
Barcode reverse
21 MB
Nadav Ahituv, UCSF
validated
fastq
reads
4
Barcode reverse
48 MB
Nadav Ahituv, UCSF
validated
fastq
reads
6
Barcode forward
541 MB
Nadav Ahituv, UCSF
validated
fastq
reads
6
Barcode reverse
537 MB
Nadav Ahituv, UCSF
validated
fastq
reads
6
UMI
565 MB
Nadav Ahituv, UCSF
validated
fastq
reads
5
UMI
22 MB
Nadav Ahituv, UCSF
validated
fastq
reads
3
Barcode reverse
881 MB
Nadav Ahituv, UCSF
validated

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
barcode to element mapping
Nadav Ahituv, UCSF
728 MB
validated