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INDEXED
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ConfigurationFile
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IGVFFI4298IIZN
IGVFFI4298IIZN
released
validated
Json view
File Set
IGVFDS2623QODS
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI1830GJBO, IGVFFI4542ISGP, IGVFFI3835VFVF, IGVFFI1508WDYW
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp15_rna_10x1_NGS2
md5sum
69dbd4d8de7df4d0ccde8c1be54b6d30
Content MD5sum
fa1b11c14662b9ff2d2adbe6d1abe6e0
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp15_rna_10x1_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG011972
—
Jesse Engreitz
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1508WDYW
fastq
reads
1
Illumina NovaSeq X
22NCFCLT3
2
2.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1830GJBO
fastq
reads
1
Read 1
Illumina NovaSeq X
22NCFCLT3
2
8.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3835VFVF
fastq
reads
1
Illumina NovaSeq X
22NCFCLT3
2
2.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4542ISGP
fastq
reads
1
Read 2
Illumina NovaSeq X
22NCFCLT3
2
18 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2174QALS
MultiplexedSample
GM25256 (WTC-11)
multiplexed sample: Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to liver for 18 days; Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to liver for 13 days; ... and 10 more samples