Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI4099YJAX
IGVFFI4099YJAX
released
validated
Json view
File Set
IGVFDS1967FHKL
(single-nucleus ATAC-seq (10x multiome))
Summary
seqspec of IGVFFI0780GMLK, IGVFFI7842VQRM, IGVFFI9383DDZQ, IGVFFI0599BUEC
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_mouse_bridge_116_atac
md5sum
302defabb70d1171851fbd30e4822014
Content MD5sum
7a5a5249fd3796c0a3b2480e37e3d1ed
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_mouse_bridge_116_atac_atac_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0599BUEC
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
HV7LKDSX5
1
7.6 GB
Ansuman Satpathy, Stanford
validated
IGVFFI0780GMLK
fastq
reads
1
Read 2
Illumina NovaSeq 6000
HV7LKDSX5
1
23 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7842VQRM
fastq
reads
1
Read 1
Illumina NovaSeq 6000
HV7LKDSX5
1
23 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9383DDZQ
fastq
reads
1
Illumina NovaSeq 6000
HV7LKDSX5
1
3.2 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0501LYEC
Tissue
left cerebral cortex
left cerebral cortex tissue, female, Mus musculus C57BL/6J (10 weeks)
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford