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INDEXED
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IGVFFI3171JACA
IGVFFI3171JACA
released
validated
Json view
File Set
IGVFDS2556FUQS
(single-nucleus ATAC-seq (10x multiome))
Summary
seqspec of IGVFFI0995JOSZ, IGVFFI2852IKKO, IGVFFI6612BHWY, IGVFFI7580CYCQ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_mouse_bridge_104_atac
md5sum
2552eca86dfd7cf97610937b61a270b2
Content MD5sum
b55a9bd041f88bd0b3e96fb3d4fb4885
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_mouse_bridge_104_atac_atac_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0995JOSZ
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
HV7LKDSX5
1
9.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2852IKKO
fastq
reads
1
Read 2
Illumina NovaSeq 6000
HV7LKDSX5
1
28 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6612BHWY
fastq
reads
1
Illumina NovaSeq 6000
HV7LKDSX5
1
3.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7580CYCQ
fastq
reads
1
Read 1
Illumina NovaSeq 6000
HV7LKDSX5
1
28 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8448JQZQ
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female, 10 weeks) left cerebral cortex tissue