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INDEXED
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ConfigurationFile
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IGVFFI2689KSCB
IGVFFI2689KSCB
released
validated
Json view
File Set
IGVFDS1816FCQL
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI3151GLAE, IGVFFI1562DYER
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3827_seqspec
md5sum
0bb99cf71c7726b324d10463e37087ea
Content MD5sum
40e4ac1b8236e01f504f4872aa6f29e7
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3827_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1562DYER
fastq
reads
3827
Read 2, Barcode index
Illumina NovaSeq 6000
H22KKDRX5
1.3 GB
Jason Buenrostro, Broad
validated
IGVFFI3151GLAE
fastq
reads
3827
Read 1
Illumina NovaSeq 6000
H22KKDRX5
781 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)