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IGVFFI2689KSCB

released
validated
File Set
IGVFDS1816FCQL(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI3151GLAE, IGVFFI1562DYER
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3827_seqspec
md5sum
0bb99cf71c7726b324d10463e37087ea
Content MD5sum
40e4ac1b8236e01f504f4872aa6f29e7
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3827_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
3827
Read 2, Barcode index
H22KKDRX5
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
3827
Read 1
H22KKDRX5
781 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
976 MB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
5.5 GB
validated