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INDEXED
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IGVFFI2455XYPU
IGVFFI2455XYPU
released
validated
Json view
File Set
IGVFDS3441CZQC
(single-nucleus ATAC-seq (10x multiome))
Summary
seqspec of IGVFFI7881VOQF, IGVFFI3968KNNB, IGVFFI1348AFUY, IGVFFI4048IXSL
File Format
yaml
Content Type
seqspec
Aliases
chongyuan-luo:ys3b_snATAC_L3_seqspec
md5sum
a71b37211a55d5701775325f5490b16b
Content MD5sum
f64531ccbba2804c669632eae81bf445
File Size
1.3 KB
Submitted File Name
/home/ec2-user/igvf/submit/yaml/year2/multiome/atac/ys3b.L3.yaml.gz
Checkfiles Version
v20
Attribution
Kathrin Plath, UCLA
(
HG012079
—
Chongyuan Luo
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1348AFUY
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
3
4.6 GB
Kathrin Plath, UCLA
validated
IGVFFI3968KNNB
fastq
reads
1
Read 1
Illumina NovaSeq 6000
3
14 GB
Kathrin Plath, UCLA
validated
IGVFFI4048IXSL
fastq
reads
1
Read 2
Illumina NovaSeq 6000
3
15 GB
Kathrin Plath, UCLA
validated
IGVFFI7881VOQF
fastq
reads
1
Read 1
Illumina NovaSeq 6000
3
2.0 GB
Kathrin Plath, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8294LIUF
MultiplexedSample
fibroblast
multiplexed sample: Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day; Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 7 days; ... and 2 more samples