audit_analysis_set_files_missing_analysis_step_version

audit_input_file_sets_derived_from

Jay Shendure

Massively parallel characterization of variants and elements impacting transcriptional regulation in dynamic cellular systems

differential gene expression quantifications

Jay Shendure, UW

K562 cell line, modified with CRISPR modifications, transfected with a guide library

K562 cell line (cellular sub pool: 10Xlane1), female, Homo sapiens modified with CRISPRa Sp-dCas9-VP64-p65-Rta (VPR), transfected with a guide library

K562 cell line (cellular sub pool: 10Xlane2), female, Homo sapiens modified with CRISPRa Sp-dCas9-VP64, transfected with a guide library

K562 cell line (cellular sub pool: 10Xlane2), female, Homo sapiens modified with CRISPRa Sp-dCas9-VP64-p65-Rta (VPR), transfected with a guide library

K562 cell line (cellular sub pool: 10Xlane1), female, Homo sapiens modified with CRISPRa Sp-dCas9-VP64, transfected with a guide library

Beth Martin

scCRISPR activation screen: differential gene expression quantifications, sparse gene count matrix

Cell Ranger Gene Count Pipeline

HG011966

Ian Whaling

jay-shendure

Nadav Ahituv

Martin Kircher

gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci

scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci

Guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci

IGVFDS9078ZWQH

Files

Attribution

IGVFDS9078ZWQH

Files

File Association Graph

Samples

Donors

MeasurementSet Input File Sets

AuxiliarySet Input File Sets

Attribution