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IGVFDS7239LNZO

released
Aliases
charles-gersbach:cd8-tcells-analysis-set-rna-seq-cas-ko-gata3
File Set Type
principal analysis
Summary
knockout RNA-seq: fold change over control, transcript quantifications
Publications
Samples
CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library

Files

2 items
tsv
transcript quantifications
GRCh38 transcript quantifications
Charles Gersbach, Duke
547 KB
validated
tsv
fold change over control
GRCh38 fold change over control
Charles Gersbach, Duke
885 KB
validated

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File Set
File
AnalysisSet

Samples

6 items
Sample Terms
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)

Donors

3 items
Aliases
  • charles-gersbach:cd8-tcells-donor-14
unspecified
Homo sapiens
  • charles-gersbach:cd8-tcells-donor-13
unspecified
Homo sapiens
  • charles-gersbach:cd8-tcells-donor-12
unspecified
Homo sapiens

AnalysisSet Input File Sets

2 items
knockout RNA-seq: transcriptome alignments
knockout RNA-seq: transcriptome alignments

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke