Home

IGVFDS0514BHNX

released
File Set Type
intermediate analysis
Summary
Unspecified assay: barcode to element mapping
Description
Assignment MPRAsnakeflow v0.3.0
Workflows
Attribution
Nadav Ahituv, UCSF

Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
barcode to element mapping
GRCh38 barcode to element mapping
Nadav Ahituv, UCSF
728 MB
validated

File Association Graph

Loading…
File Set
File
AnalysisSet
ConstructLibrarySet
CuratedSet

ConstructLibrarySet Input File Sets

1 item
Accession
Applied To Samples
reporter library targeting candidate cis-regulatory elements genome-wide
Homo sapiens (female) HEK293T pooled cell specimen transduced (lentivirus) with a reporter library
Homo sapiens (male) HepG2 pooled cell specimen transduced (lentivirus) with a reporter library

CuratedSet Input File Sets

1 item
Accession
Summary
GRCh38 elements

File Sets Using This Analysis Set as an Input

2 items
AnalysisSet
lentiMPRA: reporter experiment, reporter experiment barcode
Nadav Ahituv, UCSF
AnalysisSet
lentiMPRA: reporter experiment, reporter experiment barcode
Nadav Ahituv, UCSF

Documents

2 items
Page
Preview
QC report assignment MPRAsnakeflow v0.3.0
quality control report
MPRAsnakeflow v0.3.0 assignment workflow config file
computational protocol