IGVFDS0514BHNX

released
1{
2    "@context": "/terms/",
3    "@id": "/analysis-sets/IGVFDS0514BHNX/",
4    "@type": [
5        "AnalysisSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS0514BHNX",
10    "assay_titles": [],
11    "audit": {
12        "INTERNAL_ACTION": [
13            {
14                "category": "missing publication",
15                "detail": "Analysis set [IGVFDS0514BHNX](/analysis-sets/IGVFDS0514BHNX/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
16                "level": 30,
17                "level_name": "INTERNAL_ACTION",
18                "name": "audit_file_set_missing_publication",
19                "path": "/analysis-sets/IGVFDS0514BHNX/"
20            }
21        ]
22    },
23    "award": {
24        "@id": "/awards/HG011966/",
25        "component": "functional characterization",
26        "contact_pi": {
27            "@id": "/users/eb543cda-67b7-493c-84eb-187d0dac13ba/",
28            "title": "Jay Shendure"
29        },
30        "title": "Massively parallel characterization of variants and elements impacting transcriptional regulation in dynamic cellular systems"
31    },
32    "control_for": [],
33    "creation_timestamp": "2024-11-28T11:19:28.210173+00:00",
34    "description": "Assignment MPRAsnakeflow v0.3.0",
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37        "/documents/8cab8686-f5d2-43a9-9383-5a75a2e4245d/"
38    ],
39    "file_set_type": "intermediate analysis",
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43            "accession": "IGVFFI6803EINC",
44            "assembly": "GRCh38",
45            "content_type": "barcode to element mapping",
46            "controlled_access": false,
47            "creation_timestamp": "2024-11-28T11:42:33.952741+00:00",
48            "file_format": "tsv",
49            "file_size": 728241557,
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51            "s3_uri": "s3://igvf-files/2024/11/28/48b8d65c-37ac-4ad6-879d-39f25be41f39/IGVFFI6803EINC.tsv.gz",
52            "status": "released",
53            "submitted_file_name": "\"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/mprasnakeflow/results/assignment/assignment_barcodes.default.tsv.gz\"",
54            "upload_status": "validated"
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56    ],
57    "functional_assay_mechanisms": [],
58    "input_file_sets": [
59        {
60            "@id": "/construct-library-sets/IGVFDS1589ODOW/",
61            "accession": "IGVFDS1589ODOW",
62            "file_set_type": "reporter library",
63            "status": "released"
64        },
65        {
66            "@id": "/curated-sets/IGVFDS9607HTSX/",
67            "accession": "IGVFDS9607HTSX",
68            "file_set_type": "elements",
69            "status": "released"
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71    ],
72    "input_for": [
73        "/analysis-sets/IGVFDS2308SBSR/",
74        "/analysis-sets/IGVFDS3278AFYF/"
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76    "lab": {
77        "@id": "/labs/nadav-ahituv/",
78        "title": "Nadav Ahituv, UCSF"
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80    "protocols": [],
81    "release_timestamp": "2025-01-30T17:46:55.815778+00:00",
82    "samples": [],
83    "schema_version": "9",
84    "status": "released",
85    "submitted_by": {
86        "@id": "/users/3ad3479d-753b-4293-9c09-c0dcabfd0ddb/",
87        "title": "Max Schubach"
88    },
89    "submitted_files_timestamp": "2024-11-28T11:42:33.952741+00:00",
90    "summary": "Unspecified assay: barcode to element mapping",
91    "uuid": "9c07f36c-f9b8-4dce-a1ee-4b346645f938",
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96            "name": "MPRAsnakeflow",
97            "status": "released",
98            "uniform_pipeline": true
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100    ]
101}