IGVFFI1726ZIZH

released
validated
File Set
IGVFDS7714RCSY(ATAC-seq: alignments)
Summary
GRCh38 filtered alignments
Analysis Step Version
File Format
bam
Content Type
alignments
Content Summary
filtered alignments
Aliases
charles-gersbach:cd8-tcells-atac-seq-acute-activation-gfp-bam-rep1
md5sum
02ec7ca3e0965802dc24bdd1e379c052
Content MD5sum
a52c97e1651eb1904a215a36a3531a9e
File Size
1.7 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/SCM-69-rep1.masked.dups_marked.bam

Alignment Details

Reference Files
Filtered
True

Samples

3 items
Sample Terms
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

Files This File Derives From

2 items
fastq
reads
Charles Gersbach, Duke
1.3 GB
validated
fastq
reads
Charles Gersbach, Duke
1.3 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
peak quantifications
GRCh38 peak quantifications
Charles Gersbach, Duke
2.5 MB
validated

Attribution