Gersbach HiCAR Quantification Workflow

{
    "@context": "/terms/",
    "@id": "/workflows/IGVFWF2849QJOS/",
    "@type": [
        "Workflow",
        "Item"
    ],
    "accession": "IGVFWF2849QJOS",
    "analysis_steps": [
        {
            "@id": "/analysis-steps/IGVFWF2849QJOS-hicar-quantification-step/",
            "analysis_step_types": [
                "quantification"
            ],
            "analysis_step_versions": [
                {
                    "@id": "/analysis-step-versions/7a065c7f-9076-4e55-ae0a-8c0ae1b1c13e/",
                    "software_versions": [
                        {
                            "@id": "/software-versions/hicar-quantification-v1.0.0/",
                            "name": "hicar-quantification-v1.0.0",
                            "software": {
                                "@id": "/software/hicar-quantification/",
                                "name": "hicar-quantification",
                                "status": "released"
                            },
                            "status": "released"
                        }
                    ],
                    "status": "released"
                }
            ],
            "name": "IGVFWF2849QJOS-hicar-quantification-step",
            "output_content_types": [
                "bin paired count"
            ],
            "status": "in progress"
        },
        {
            "@id": "/analysis-steps/IGVFWF2849QJOS-hicar-deseq-step/",
            "analysis_step_types": [
                "quantification",
                "filtering"
            ],
            "analysis_step_versions": [
                {
                    "@id": "/analysis-step-versions/0622140a-5e26-4deb-a308-89561ca11e22/",
                    "software_versions": [
                        {
                            "@id": "/software-versions/deseq2-v1.40.0/",
                            "name": "deseq2-v1.40.0",
                            "software": {
                                "@id": "/software/deseq2/",
                                "name": "deseq2",
                                "status": "released"
                            },
                            "status": "released"
                        }
                    ],
                    "status": "released"
                }
            ],
            "name": "IGVFWF2849QJOS-hicar-deseq-step",
            "output_content_types": [
                "differential chromatin contact quantifications"
            ],
            "status": "in progress"
        }
    ],
    "audit": {},
    "award": {
        "@id": "/awards/HG012053/",
        "component": "functional characterization"
    },
    "creation_timestamp": "2024-12-05T03:50:25.296354+00:00",
    "lab": {
        "@id": "/labs/charles-gersbach/",
        "title": "Charles Gersbach, Duke"
    },
    "name": "Gersbach HiCAR Quantification Workflow",
    "release_timestamp": "2024-12-05T03:50:44.015666+00:00",
    "schema_version": "5",
    "source_url": "https://github.com/Gersbachlab-Bioinformatics/myosin_enhancer/tree/main/figure5_scripts/human-crispra",
    "status": "released",
    "submitted_by": {
        "@id": "/users/1e75d989-a438-4d77-a451-8a297fd3636e/",
        "title": "Ian Whaling"
    },
    "summary": "IGVFWF2849QJOS",
    "uniform_pipeline": false,
    "uuid": "c035befe-b503-4942-96a0-3cb5b09afaff",
    "workflow_version": 1
}