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Tissue
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posterior cingulate gyrus — IGVFSM3460UGCL
posterior cingulate gyrus — IGVFSM3460UGCL
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Summary
Homo sapiens (female, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment
Sample Terms
posterior cingulate gyrus
Sex
female
Age
80 years
Post-mortem Interval
208 minutes
Preservation Method
flash-freezing
Taxa
Homo sapiens
Sources
banner-health
Date Harvested
March 7, 2023
Aliases
igvf:corces_tissue_BANN1352_CING
Protocols
https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO9211DWXZ
igvf:corces_donor_BANN1352
female
Homo sapiens
File Sets
48 items
1
2
3
4
5
Accession
Summary
Aliases
Lab
IGVFDS0058HQMM
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP014_G4_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS0682HDZQ
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP029_G5_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0688NEEC
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP029_G8_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0738WMFX
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X041_G8_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS0957VZJU
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP014_G6_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1260SOEX
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP029_G6_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1460TTLQ
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP029_G2_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS1691KPWU
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_X041_G1_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS1915WBYK
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP029_G3_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1932PIPJ
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP029_G3_RNA
Ryan Corces, Gladstone Institute UCSF
Multiplexed In Samples
24 items
1
2
3
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM0019MOAR
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples
IGVFSM0027DAWZ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 72 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; Homo sapiens (female, 82 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples
IGVFSM0496VQZI
MultiplexedSample
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples
IGVFSM0728SZZR
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 72 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; Homo sapiens (female, 82 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples
IGVFSM1252DLAM
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples
IGVFSM1990PUGQ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 72 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; Homo sapiens (female, 82 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples
IGVFSM2738AFKG
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples
IGVFSM3192MEUT
MultiplexedSample
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples
IGVFSM3839YDOW
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples
IGVFSM3938LXBP
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 72 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; Homo sapiens (female, 82 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF