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cerebellar cortex — IGVFSM0656XWUJ
cerebellar cortex — IGVFSM0656XWUJ
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Summary
Homo sapiens (male, 89 years) cerebellar cortex tissue
Sample Terms
cerebellar cortex
Sex
male
Age
89 years
Post-mortem Interval
150 minutes
Preservation Method
flash-freezing
Taxa
Homo sapiens
Sources
banner-health
Date Harvested
November 8, 2022
Aliases
igvf:corces_tissue_BANN0341_CBL
Protocols
https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO7754VJKM
igvf:corces_donor_BANN0341
male
Homo sapiens
File Sets
32 items
1
2
3
4
Accession
Summary
Aliases
Lab
IGVFDS0247BVMI
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP006_G5_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0252BRRM
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X014_G2_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0299PZQV
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP006_G7_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0585JEMM
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP006_G2_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS0646FGSI
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP006_G7_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS0802QULQ
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP006_G4_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS1296AIPR
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP006_G8_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS2462QSTN
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X014_G5_ATAC
Ryan Corces, Gladstone Institute UCSF
IGVFDS3136TLZY
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP006_G2_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS3171AYJR
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP006_G4_RNA
Ryan Corces, Gladstone Institute UCSF
Multiplexed In Samples
16 items
1
2
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2981VRFX
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM3399SGBD
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM3402LHVF
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM3715NVPJ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM3915PNAB
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM4095XUWZ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM5801EHME
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM6003RYZR
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM6111OIGC
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples
IGVFSM7010YPUF
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF