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IGVFFI9846AWHA

released
validation exempted
File Set
IGVFDS3005LSBM(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
/analysis-step-versions/699d6738-4033-4afc-b6f3-1d82a80e0b41/
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf12_peaks_10x3
md5sum
c7a46e47393aa60fc0e53c16fc1e25a3
Content MD5sum
d0389c3a53fd12b9cf5bebcf6d3d295b
File Size
1.2 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf12/e12l3_peaks.bed
Checkfiles Version
v14
Validation Error Detail
{"md5sum": "original md5sum d0389c3a53fd12b9cf5bebcf6d3d295b does not match newly calculated md5sum c7a46e47393aa60fc0e53c16fc1e25a3.", "validate_files": "Error [file=/home/ubuntu/igvf-restricted-files/2025/01/28/0d23b10e-136c-4a43-8ed7-8584a3ac1317/IGVFFI9846AWHA.bed.gz, line=144607]: chrom KI270728.1 not found [KI270728.1\t232279\t233180]\nAborting ... found error."}
Attribution
Ansuman Satpathy, Stanford

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
5.2 GB
validation exempted