IGVFFI9763CJKG

released
validated
File Set
IGVFDS9490WNXZ(ATAC-seq: fold change over control, peak quantifications)
Summary
GRCh38 peak quantifications
Analysis Step Version
File Format
tsv
Content Type
peak quantifications
Aliases
charles-gersbach:tabular-file-bulk-atac-count
md5sum
91559b17fd4b62d16d58f46b3a20b101
Content MD5sum
f8c8be6cb7545280ffef99f40e9d4376
File Size
4.3 MB
Submitted File Name
/hpc/group/gersbachlab/tda17/IGVF_data_files/ATAC/atacseq_counts.tsv.gz

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

6 items
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens treated with 4 μM GSK3 inhibition for 7 days
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens treated with 4 μM GSK3 inhibition for 7 days
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens treated with 4 μM GSK3 inhibition for 7 days
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens

Files This File Derives From

6 items
bam
alignments
Charles Gersbach, Duke
3.3 GB
validated
bam
alignments
Charles Gersbach, Duke
3.0 GB
validated
bam
alignments
Charles Gersbach, Duke
1.9 GB
validated
bam
alignments
Charles Gersbach, Duke
1.3 GB
validated
bam
alignments
Charles Gersbach, Duke
3.5 GB
validated
bam
alignments
Charles Gersbach, Duke
5.0 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
csv
fold change over control
GRCh38 fold change over control
Charles Gersbach, Duke
4.9 MB
validated

Attribution