IGVFFI9333CGMN

{
    "@context": "/terms/",
    "@id": "/tabular-files/IGVFFI9333CGMN/",
    "@type": [
        "TabularFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI9333CGMN",
    "aliases": [
        "jesse-engreitz:tabular_file_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_gRNA_sequences_GRCh38"
    ],
    "assay_titles": [],
    "assembly": "GRCh38",
    "audit": {
        "NOT_COMPLIANT": [
            {
                "category": "missing file format specifications",
                "detail": "Tabular file [IGVFFI9333CGMN](/tabular-files/IGVFFI9333CGMN/) has no `file_format_specifications`. Tabular files are expected to link to a file format specifications document describing the headers of the file.",
                "level": 50,
                "level_name": "NOT_COMPLIANT",
                "name": "audit_tabular_file_no_file_format_specifications",
                "path": "/tabular-files/IGVFFI9333CGMN/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "barcode_map_for": [],
    "content_md5sum": "0b0131ea2a07c83188e9ba9264540fad",
    "content_type": "guide RNA sequences",
    "controlled_access": false,
    "creation_timestamp": "2024-01-25T23:04:04.183491+00:00",
    "description": "gRNA library sequence of guides targeting DNase peak in TeloHAEC in chr15:80,975,273-81,134,905",
    "file_format": "bed",
    "file_format_type": "bed3",
    "file_set": {
        "@id": "/curated-sets/IGVFDS3201UTPN/",
        "accession": "IGVFDS3201UTPN",
        "file_set_type": "guide RNAs",
        "status": "released",
        "summary": "GRCh38 guide RNAs"
    },
    "file_size": 3902,
    "gene_list_for": [],
    "href": "/tabular-files/IGVFFI9333CGMN/@@download/IGVFFI9333CGMN.bed.gz",
    "input_file_for": [],
    "integrated_in": [
        {
            "@id": "/construct-library-sets/IGVFDS7621RRLM/",
            "file_set_type": "guide library",
            "status": "released",
            "summary": "guide (sgRNA) library targeting candidate cis-regulatory elements in a genomic locus"
        }
    ],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "md5sum": "484710ef231f50e2269c6108ad8f236c",
    "release_timestamp": "2024-02-07T19:02:28.920536+00:00",
    "s3_uri": "s3://igvf-files/2024/01/25/7f8384bb-9a62-49cb-bb31-9a8e40551ee5/IGVFFI9333CGMN.bed.gz",
    "schema_version": "13",
    "status": "released",
    "submitted_by": {
        "@id": "/users/4b2083b4-24c1-41d8-9daa-e79299f00d6e/",
        "title": "Ronghao Zhou"
    },
    "submitted_file_name": "/Users/ronghao/Desktop/Research/data/eRZ10_FlowFISH/TLNRD1/design/20220126_TeloHAEC_CRISPRi_TLNRD1_GRCh38.design.bed.gz",
    "summary": "GRCh38 guide RNA sequences",
    "upload_status": "validated",
    "uuid": "7f8384bb-9a62-49cb-bb31-9a8e40551ee5"
}