IGVFFI9129QCEU

released
validation exempted
File Set
IGVFDS8898JDCK(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf5_peaks_10x3
md5sum
71684d83eeaaaa08cf552448c8ba91b0
Content MD5sum
209efcc86bda5f325927f3b12bb6a551
File Size
2.4 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf5/e5l3_peaks.bed
Checkfiles Version
Validation Error Detail
{"md5sum": "original md5sum 209efcc86bda5f325927f3b12bb6a551 does not match newly calculated md5sum 71684d83eeaaaa08cf552448c8ba91b0.", "validate_files": "Error [file=/home/ubuntu/igvf-files/2025/01/28/ed749c61-38bc-4f08-aaee-9f9e82a44628/IGVFFI9129QCEU.bed.gz, line=289397]: chrom KI270728.1 not found [KI270728.1\t232215\t233175]\nAborting ... found error."}

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

4 items
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; ... and 6 more samples
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; ... and 6 more samples
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; ... and 6 more samples
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; ... and 6 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
5.9 GB
validation exempted

Attribution