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IGVFFI9078MASJ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4340KVZI(single-nucleus ATAC-seq (10x multiome), single-nucleus RNA sequencing assay (10x multiome))
Summary
barcode to element mapping
Analysis Step Version
/analysis-step-versions/e904b252-f348-4c6d-835c-5ae6bf91b9a0/
File Format
csv
Content Type
barcode to element mapping
Aliases
harinder-singh:Bcells_don1_pitt_multiome_day012_per_barcode_metrics
md5sum
9844cea8f509bdf74186975bb4570af6
Content MD5sum
01dcda1f1f877f6bdc82fa87cf3e186e
File Size
17 MB
Submitted File Name
/ix/djishnu/peasena/primary_multiome/donor1_upmc/cellranger_intermediate_files/day012/per_barcode_metrics.csv.gz
Checkfiles Version
v20
Attribution
Harinder Singh, University of Pittsburgh

File Format Specifications

1 item
Page
Description
Type
Download
Standardized File Format
Preview
Format specification for per_barcode_metrics.csv files derived from cellranger arc
file format specification

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days

Files This File Derives From

24 items
fastq
reads
Harinder Singh, University of Pittsburgh
379 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
2.3 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
4.2 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
914 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
385 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
4.1 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
2.3 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
1.2 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
1.2 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
909 MB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
hdf5
filtered feature barcode matrix
cell by gene expression by peak in filtered feature barcode matrix
Harinder Singh, University of Pittsburgh
514 MB
validated