IGVFFI8832FBGF

released
validation exempted
File Set
IGVFDS9170BNTS(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf3_peaks_10x3
md5sum
28019601e7f2ad7623f8954335e8e840
Content MD5sum
947542da88d2492e23376aeb0f98a316
File Size
2.1 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf3/e3l3_peaks.bed
Checkfiles Version
Validation Error Detail
{"md5sum": "original md5sum 947542da88d2492e23376aeb0f98a316 does not match newly calculated md5sum 28019601e7f2ad7623f8954335e8e840.", "validate_files": "Error [file=/home/ubuntu/igvf-files/2025/01/28/22755f4b-d126-4c6c-9ddd-5477afb73453/IGVFFI8832FBGF.bed.gz, line=248906]: chrom KI270728.1 not found [KI270728.1\t232289\t233182]\nAborting ... found error."}

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

4 items
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
3.1 GB
validation exempted

Attribution