IGVFFI7212WXZR

released
validation exempted
File Set
IGVFDS0793KZKS(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
fragments
Analysis Step Version
File Format
tsv
Content Type
fragments
Aliases
ansuman-satpathy:igvf12_fragments_10x1
md5sum
304137c0119405f6756fc952aee742ca
Content MD5sum
df7597b5f09aa016eb81f4657880e0dd
File Size
4.3 GB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf12/e12l1_fragments.tsv.gz
Checkfiles Version
Validation Error Detail
{"tabular_file_error": {"schema": null, "error_number_limit": 1000, "number_of_errors": 1000, "extra-cell": {"count": 1000, "description": "This row has more values compared to the header row (the first row in the data source). A key concept is that all the rows in tabular data must have the same number of columns.", "details": [{"row_number": 52, "field_number": 2, "note": ""}, {"row_number": 52, "field_number": 3, "note": ""}]}, "error_types": ["extra-cell"]}}

File Format Specifications

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples

Files This File Derives From

28 items
fastq
reads
Ansuman Satpathy, Stanford
909 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
2.2 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
4.0 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
4.0 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
908 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
3.9 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
895 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
901 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
2.2 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
903 MB
validated

Files Derived From This File

2 items
bed
peaks
GRCh38 peaks
Ansuman Satpathy, Stanford
1.2 MB
validation exempted
tbi
index
index of IGVFFI7212WXZR
Ansuman Satpathy, Stanford
1.6 MB
validated

Attribution