IGVFFI7166LYGQ

released
validated
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11        "ansuman-satpathy:igvf6_multiseq_count_matrix_10x4"
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13    "analysis_step_version": "/analysis-step-versions/49020a48-9224-4d9c-8d55-2264aaf17a1f/",
14    "assay_titles": [
15        "10x multiome with MULTI-seq"
16    ],
17    "audit": {},
18    "award": {
19        "@id": "/awards/HG011972/",
20        "component": "functional characterization"
21    },
22    "barcode_map_for": [],
23    "checkfiles_version": "v16",
24    "content_md5sum": "a50a2b73caaf712525618cddd61e022a",
25    "content_type": "cell hashing barcodes",
26    "controlled_access": false,
27    "creation_timestamp": "2025-02-19T23:31:48.180756+00:00",
28    "derived_from": [
29        "/sequence-files/IGVFFI9231PEVJ/",
30        "/sequence-files/IGVFFI4932OQSB/",
31        "/sequence-files/IGVFFI3245FOSR/",
32        "/sequence-files/IGVFFI1487ZOQT/",
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34        "/sequence-files/IGVFFI2613IAKF/",
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46            "description": "MULTI-seq barcode count matrix definition"
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63            {
64                "@id": "/multiplexed-samples/IGVFSM2522EBPE/",
65                "@type": [
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68                    "Item"
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70                "accession": "IGVFSM2522EBPE",
71                "classifications": [
72                    "cell line",
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74                    "multiplexed sample"
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76                "disease_terms": [],
77                "modifications": [],
78                "sample_terms": [
79                    {
80                        "@id": "/sample-terms/EFO_0003042/",
81                        "status": "released",
82                        "term_name": "H1-hESC"
83                    }
84                ],
85                "status": "released",
86                "summary": "multiplexed sample: Homo sapiens (male) H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days; Homo sapiens (male) H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days; ... and 6 more samples",
87                "taxa": "Homo sapiens",
88                "treatments": []
89            }
90        ],
91        "status": "released",
92        "summary": "single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)"
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98    "integrated_in": [],
99    "lab": {
100        "@id": "/labs/ansuman-satpathy/",
101        "title": "Ansuman Satpathy, Stanford"
102    },
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104    "md5sum": "0373c276620284c70ad19484adb20fcf",
105    "primer_design_for": [],
106    "quality_metrics": [],
107    "release_timestamp": "2025-03-07T06:04:51.003180+00:00",
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109    "schema_version": "15",
110    "status": "released",
111    "submitted_by": {
112        "@id": "/users/353655bc-31a1-4cd9-bac3-c7d34faf722f/",
113        "title": "Christopher Mcginnis"
114    },
115    "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/multi_tsvs/e6l4_tag_mtx.tsv.gz",
116    "summary": "cell hashing barcodes",
117    "upload_status": "validated",
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119    "workflow": {
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121        "name": "Satpathy Cell Ranger",
122        "uniform_pipeline": false
123    }
124}