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IGVFFI7080OLYT

released
validated
File Set
IGVFDS9896QVZT(single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
cell hashing barcodes
Analysis Step Version
/analysis-step-versions/49020a48-9224-4d9c-8d55-2264aaf17a1f/
File Format
tsv
Content Type
cell hashing barcodes
Aliases
ansuman-satpathy:igvf3_multiseq_count_matrix_10x4
md5sum
820da8ccd95482e833fc3c2a7fa3b471
Content MD5sum
b2860157f9996cb4d7255837be0cb21b
File Size
290 KB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/multi_tsvs/e3l4_tag_mtx.tsv.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford

File Format Specifications

1 item
Page
Description
Type
Download
Preview
MULTI-seq barcode count matrix definition
file format specification

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 15 days; Homo sapiens (male) HepG2 cell line grown in DMEM without serum; ... and 10 more samples

Files This File Derives From

8 items
fastq
reads
Ansuman Satpathy, Stanford
555 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.2 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
209 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
160 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
563 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.3 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
163 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
215 MB
validated