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IGVFFI6830YLEK

released
validated
File Set
IGVFDS5239SBBT(activation Perturb-seq: differential gene expression quantifications)
Summary
GRCh38 differential gene expression quantifications
Analysis Step Version
/analysis-step-versions/591f5c4d-08fe-4de1-a25a-d3aef0d39567/
File Format
tsv
Content Type
differential gene expression quantifications
Aliases
charles-gersbach:cd8-tcells-perturb-seq-10x-5prime-crispra-de-mast-results
md5sum
b757ef67dac4a79a2f5e97256396c6a3
Content MD5sum
2d9d4c0c0414adae82ae716409f88c52
File Size
23 MB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/grna.de.crispra.umi_thres_4.aggr.txt.gz

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

3 items
Sample Terms
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRa Sa-dCas9-VP64, transduced (lentivirus) with a guide library (MOI of 0.4)
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRa Sa-dCas9-VP64, transduced (lentivirus) with a guide library (MOI of 0.4)
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRa Sa-dCas9-VP64, transduced (lentivirus) with a guide library (MOI of 0.4)

Files This File Derives From

3 items
tar
filtered feature barcode matrix
Charles Gersbach, Duke
408 MB
validated
tar
filtered feature barcode matrix
Charles Gersbach, Duke
336 MB
validated
tar
filtered feature barcode matrix
Charles Gersbach, Duke
310 MB
validated

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke