IGVFFI6803EINC

released
validated
1{
2    "@context": "/terms/",
3    "@id": "/tabular-files/IGVFFI6803EINC/",
4    "@type": [
5        "TabularFile",
6        "File",
7        "Item"
8    ],
9    "accession": "IGVFFI6803EINC",
10    "analysis_step_version": "/analysis-step-versions/85a076e7-4167-4a08-a523-905fc3ee1b8b/",
11    "assay_titles": [],
12    "assembly": "GRCh38",
13    "audit": {},
14    "award": {
15        "@id": "/awards/HG011966/",
16        "component": "functional characterization"
17    },
18    "barcode_map_for": [],
19    "content_md5sum": "f8d7c5c5cd118fb1ba3c276da014176f",
20    "content_type": "barcode to element mapping",
21    "controlled_access": false,
22    "creation_timestamp": "2024-11-28T11:42:33.952741+00:00",
23    "derived_from": [
24        "/tabular-files/IGVFFI2041KXFD/",
25        "/sequence-files/IGVFFI7003XVUG/",
26        "/sequence-files/IGVFFI8640LLIG/",
27        "/sequence-files/IGVFFI4403ENTR/",
28        "/sequence-files/IGVFFI5231ATBS/",
29        "/sequence-files/IGVFFI0576IRDC/",
30        "/sequence-files/IGVFFI2142OYFW/",
31        "/sequence-files/IGVFFI0921LXBF/",
32        "/sequence-files/IGVFFI6354NJGB/",
33        "/sequence-files/IGVFFI6807PKQA/"
34    ],
35    "description": "Barcode to element assignment",
36    "file_format": "tsv",
37    "file_format_specifications": [
38        "/documents/43d602e1-e93c-4d84-9cc8-2952d43c5f67/"
39    ],
40    "file_set": {
41        "@id": "/analysis-sets/IGVFDS0514BHNX/",
42        "@type": [
43            "AnalysisSet",
44            "FileSet",
45            "Item"
46        ],
47        "accession": "IGVFDS0514BHNX",
48        "file_set_type": "intermediate analysis",
49        "samples": [],
50        "status": "released",
51        "summary": "Unspecified assay: barcode to element mapping"
52    },
53    "file_size": 728241557,
54    "gene_list_for": [],
55    "href": "/tabular-files/IGVFFI6803EINC/@@download/IGVFFI6803EINC.tsv.gz",
56    "input_file_for": [
57        "/tabular-files/IGVFFI3395FJLK/",
58        "/tabular-files/IGVFFI6179OMKY/",
59        "/tabular-files/IGVFFI6630MFYW/",
60        "/tabular-files/IGVFFI5781OGFX/",
61        "/configuration-files/IGVFFI9044QYNE/",
62        "/configuration-files/IGVFFI4045BFNH/",
63        "/configuration-files/IGVFFI5900RDDY/",
64        "/configuration-files/IGVFFI1305YIYC/",
65        "/configuration-files/IGVFFI4648WGOB/",
66        "/configuration-files/IGVFFI2259UIHW/",
67        "/configuration-files/IGVFFI2192SCYJ/",
68        "/configuration-files/IGVFFI2482NUQM/",
69        "/configuration-files/IGVFFI5880RPSG/",
70        "/configuration-files/IGVFFI3030ULLN/",
71        "/configuration-files/IGVFFI5045HRAK/",
72        "/configuration-files/IGVFFI2244VIBN/",
73        "/tabular-files/IGVFFI1492BOLP/",
74        "/tabular-files/IGVFFI3765GJLD/"
75    ],
76    "integrated_in": [],
77    "lab": {
78        "@id": "/labs/nadav-ahituv/",
79        "title": "Nadav Ahituv, UCSF"
80    },
81    "loci_list_for": [],
82    "md5sum": "118ed4c01dc7ac051375bfddc3348490",
83    "quality_metrics": [
84        "/mpra-quality-metrics/8045ae94-1239-4fd9-a753-f0b437240dd0/"
85    ],
86    "release_timestamp": "2025-01-30T17:46:55.885563+00:00",
87    "s3_uri": "s3://igvf-files/2024/11/28/48b8d65c-37ac-4ad6-879d-39f25be41f39/IGVFFI6803EINC.tsv.gz",
88    "schema_version": "15",
89    "status": "released",
90    "submitted_by": {
91        "@id": "/users/3ad3479d-753b-4293-9c09-c0dcabfd0ddb/",
92        "title": "Max Schubach"
93    },
94    "submitted_file_name": "\"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/mprasnakeflow/results/assignment/assignment_barcodes.default.tsv.gz\"",
95    "submitter_comment": "MPRAsnakeflow v0.3.0",
96    "summary": "GRCh38 barcode to element mapping",
97    "upload_status": "validated",
98    "uuid": "48b8d65c-37ac-4ad6-879d-39f25be41f39",
99    "workflow": {
100        "@id": "/workflows/IGVFWF6032PEGT/",
101        "name": "MPRAsnakeflow",
102        "uniform_pipeline": true
103    }
104}