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IGVFFI6782BDAW

released
validated
File Set
IGVFDS0120EBCZ(Proliferation CRISPR base editing, cutting screen: guide quantifications, variant effects)
Summary
variant effects
Analysis Step Version
/analysis-step-versions/46ef0779-5c59-46d0-8832-076b589440da/
File Format
csv
Content Type
variant effects
Aliases
daniel-bauer:chrX_mageck_variant_scores
md5sum
2ab7e4b957d99b00cf3eebd8957af9cf
Content MD5sum
7318fe03d37add5626fa291387d8405d
File Size
64 KB
Submitted File Name
chrX_mageck_variant_scores.csv.gz
Checkfiles Version
Legacy version of checkfiles

File Format Specifications

1 item
Page
Description
Type
Download
Preview
File format specification for per-variant scores produced by MAGeCK
file format specification

Samples

12 items
Sample Terms
Summary
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR base editing SpRY-ABE8e, transduced (lentivirus) with a guide library
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR cutting SpRY, transduced (lentivirus) with a guide library
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR cutting SpRY, transduced (lentivirus) with a guide library
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR base editing SpRY-ABE8e, transduced (lentivirus) with a guide library
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR base editing SpRY-ABE8e, transduced (lentivirus) with a guide library
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR cutting SpRY, transduced (lentivirus) with a guide library
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR cutting SpRY, transduced (lentivirus) with a guide library
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR cutting SpRY, transduced (lentivirus) with a guide library
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR cutting SpRY, transduced (lentivirus) with a guide library
InVitroSystem
HUDEP-2 cell line, Homo sapiens modified with CRISPR base editing SpRY-ABE8e, transduced (lentivirus) with a guide library

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
csv
guide quantifications
Daniel Bauer, HSCI
345 KB
validated

Attribution

Award
HG012010
Principal Investigator(s)
Contact P.I.
Luca Pinello
Lab
Daniel Bauer, HSCI