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IGVFFI6479UBZC

released
validation exempted
File Set
IGVFDS0398ALPE(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
/analysis-step-versions/699d6738-4033-4afc-b6f3-1d82a80e0b41/
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf17_peaks_10x1
md5sum
d5e451b06bef8509ad0877c9fb4ddcb4
Content MD5sum
441682147ea590776c14d989c8c9f18f
File Size
3.2 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf17/e17l1_peaks.bed
Checkfiles Version
v14
Validation Error Detail
{"md5sum": "original md5sum 441682147ea590776c14d989c8c9f18f does not match newly calculated md5sum d5e451b06bef8509ad0877c9fb4ddcb4.", "validate_files": "Error [file=/home/ubuntu/igvf-files/2025/01/28/18ecea81-0d1b-4f83-aab2-57aadaa49852/IGVFFI6479UBZC.bed.gz, line=392918]: chrom KI270727.1 not found [KI270727.1\t52073\t52950]\nAborting ... found error."}
Attribution
Ansuman Satpathy, Stanford

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) RUES2 differentiated cell specimen induced to gastrula for 2 days; Homo sapiens (female) RUES2 differentiated cell specimen induced to gastrula for 1 day; ... and 10 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
5.3 GB
validation exempted