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IGVFFI6427YZCN

released
validated
File Set
IGVFDS2175LLDQ(SUPERSTARR: alignments, index, reporter genomic variant effects, reporter variants)
Summary
GRCh38 reporter genomic variant effects
File Format
tsv
Content Type
reporter genomic variant effects
Aliases
tim-reddy:starr-seq-bird-reporter-variant-file-P014
md5sum
ac568d2551d98c13149b7be8dd37f688
Content MD5sum
9745a591c7c19939011f80cdcb649e69
File Size
266 MB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_1_STARR_seq/K562.starrseq.bird_reporter_variant.pool14.na_empty.txt.gz
Checkfiles Version
v20
Attribution
Bill Majoros, Duke

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

1 item
Page
Description
Type
Download
Preview
Reporter genomic variant effect file format specification
file format specification

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) K562 cell line transfected with a reporter library

Files This File Derives From

2 items
tsv
reporter genomic variant effects
Bill Majoros, Duke
121 MB
validated
tsv
reporter variants
Bill Majoros, Duke
51 MB
validation exempted