IGVFFI5952NKYY

released
validated
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11        "ansuman-satpathy:igvf11_multiseq_count_matrix_10x3"
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13    "analysis_step_version": "/analysis-step-versions/49020a48-9224-4d9c-8d55-2264aaf17a1f/",
14    "assay_titles": [
15        "10x multiome with MULTI-seq"
16    ],
17    "audit": {},
18    "award": {
19        "@id": "/awards/HG011972/",
20        "component": "functional characterization"
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23    "checkfiles_version": "v16",
24    "content_md5sum": "4f96455928875cfad0b6ae9c46d51d30",
25    "content_type": "cell hashing barcodes",
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27    "creation_timestamp": "2025-02-19T23:32:46.156090+00:00",
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29        "/sequence-files/IGVFFI6512VPPO/",
30        "/sequence-files/IGVFFI8218BXBQ/",
31        "/sequence-files/IGVFFI1459EWYM/",
32        "/sequence-files/IGVFFI1863KESP/",
33        "/sequence-files/IGVFFI5413KNYJ/",
34        "/sequence-files/IGVFFI1258KYDW/",
35        "/sequence-files/IGVFFI8044RKGJ/",
36        "/sequence-files/IGVFFI1547NZHW/"
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42            "description": "MULTI-seq barcode count matrix definition"
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54        "data_use_limitation_summaries": [
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66                "accession": "IGVFSM6160ZDRZ",
67                "classifications": [
68                    "differentiated cell specimen",
69                    "multiplexed sample"
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71                "disease_terms": [],
72                "modifications": [],
73                "sample_terms": [
74                    {
75                        "@id": "/sample-terms/EFO_0005904/",
76                        "status": "released",
77                        "term_name": "H7-hESC"
78                    },
79                    {
80                        "@id": "/sample-terms/EFO_0009747/",
81                        "status": "released",
82                        "term_name": "GM25256 (WTC-11)"
83                    }
84                ],
85                "status": "released",
86                "summary": "multiplexed sample: Homo sapiens (female) H7-hESC differentiated cell specimen; Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days; ... and 10 more samples",
87                "taxa": "Homo sapiens",
88                "treatments": []
89            }
90        ],
91        "status": "released",
92        "summary": "single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)"
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99    "lab": {
100        "@id": "/labs/ansuman-satpathy/",
101        "title": "Ansuman Satpathy, Stanford"
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104    "md5sum": "4fbfb557a08956d28c13a5ee716d55f5",
105    "primer_design_for": [],
106    "quality_metrics": [],
107    "release_timestamp": "2025-03-07T06:05:06.143592+00:00",
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111    "submitted_by": {
112        "@id": "/users/353655bc-31a1-4cd9-bac3-c7d34faf722f/",
113        "title": "Christopher Mcginnis"
114    },
115    "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/multi_tsvs/e11l3_tag_mtx.tsv.gz",
116    "summary": "cell hashing barcodes",
117    "upload_status": "validated",
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119    "workflow": {
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121        "name": "Satpathy Cell Ranger",
122        "uniform_pipeline": false
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