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IGVFFI5790ZRAD

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9046UDPN(single-nucleus ATAC-seq (10x multiome), single-nucleus RNA sequencing assay (10x multiome))
Summary
fragments
Analysis Step Version
/analysis-step-versions/e904b252-f348-4c6d-835c-5ae6bf91b9a0/
File Format
tsv
Content Type
fragments
Aliases
harinder-singh:Bcells_don1_pitt_multiome_day56_atac_fragments
md5sum
4c342368cc0c3cea19fccf1f9df89a4c
Content MD5sum
9e26956e3fab17764b3c09e8b93c9d02
File Size
1.8 GB
Submitted File Name
/ix/djishnu/Common_Folder/Jingyu_Data/multiome_1st_donor_UPMC_day5_6/outs/atac_fragments.tsv.gz
Checkfiles Version
v20
Attribution
Harinder Singh, University of Pittsburgh

File Format Specifications

1 item
Page
Description
Type
Download
Standardized File Format
Preview
Format specification for atac_fragments.csv files derived from cellranger arc
file format specification

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days

Files This File Derives From

24 items
fastq
reads
Harinder Singh, University of Pittsburgh
2.2 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
418 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
1.3 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
1.3 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
457 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
2.7 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
4.0 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
412 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
4.1 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
2.7 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
hdf5
filtered feature barcode matrix
cell by gene expression by peak in filtered feature barcode matrix
Harinder Singh, University of Pittsburgh
514 MB
validated