{
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"File",
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],
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"aliases": [
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],
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"assay_titles": [
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],
"audit": {},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
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"creation_timestamp": "2025-01-28T05:50:29.232667+00:00",
"derived_from": [
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"/sequence-files/IGVFFI8805ZTIW/",
"/sequence-files/IGVFFI0059KQUU/",
"/sequence-files/IGVFFI3240KMDW/",
"/sequence-files/IGVFFI5188FQQU/",
"/sequence-files/IGVFFI5622EDZO/",
"/sequence-files/IGVFFI1873DKIW/",
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],
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"file_format_specifications": [
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],
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"sample_terms": [
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"term_name": "HepG2"
},
{
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},
{
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],
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"taxa": "Homo sapiens",
"treatments": []
},
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{
"@id": "/sample-terms/EFO_0009747/",
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}
],
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"summary": "multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
},
{
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{
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}
],
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"summary": "multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
},
{
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"cell line",
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"multiplexed sample"
],
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},
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},
{
"@id": "/sample-terms/EFO_0009747/",
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}
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"taxa": "Homo sapiens",
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}
],
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"notes": "File has # in headers, the current version of checkfiles does not allow for that but this is a valid file output from cell ranger. Therefore, we have patched the upload_status to \"validation exempted\"",
"quality_metrics": [],
"release_timestamp": "2025-03-07T06:04:16.816885+00:00",
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"title": "Christopher Mcginnis"
},
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"summary": "fragments",
"upload_status": "validation exempted",
"uuid": "95f6c976-56df-4b24-859b-807e3ee8bbab",
"validation_error_detail": "{\"tabular_file_error\": {\"schema\": null, \"error_number_limit\": 1000, \"number_of_errors\": 1000, \"extra-cell\": {\"count\": 1000, \"description\": \"This row has more values compared to the header row (the first row in the data source). A key concept is that all the rows in tabular data must have the same number of columns.\", \"details\": [{\"row_number\": 52, \"field_number\": 2, \"note\": \"\"}, {\"row_number\": 52, \"field_number\": 3, \"note\": \"\"}]}, \"error_types\": [\"extra-cell\"]}}",
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"name": "Satpathy Cell Ranger",
"uniform_pipeline": false
}
}