IGVFFI5466PMIB

released
validated
{
    "@context": "/terms/",
    "@id": "/tabular-files/IGVFFI5466PMIB/",
    "@type": [
        "TabularFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI5466PMIB",
    "aliases": [
        "tim-reddy:starr-seq-variants-vcf-P017"
    ],
    "analysis_step_version": "/analysis-step-versions/c8de4554-6fda-4373-aa41-5574220df999/",
    "assay_titles": [],
    "assembly": "GRCh38",
    "audit": {},
    "award": {
        "@id": "/awards/HG012053/",
        "component": "functional characterization"
    },
    "barcode_map_for": [],
    "checkfiles_version": "v17",
    "content_md5sum": "bbc926d1abbd2b32e827b23feb65b3c7",
    "content_type": "variants",
    "controlled_access": false,
    "creation_timestamp": "2025-02-24T17:22:26.180856+00:00",
    "file_format": "vcf",
    "file_set": {
        "@id": "/curated-sets/IGVFDS2029KFZW/",
        "@type": [
            "CuratedSet",
            "FileSet",
            "Item"
        ],
        "accession": "IGVFDS2029KFZW",
        "file_set_type": "variants",
        "status": "released",
        "summary": "Homo sapiens GRCh38 variants",
        "taxa": "Homo sapiens"
    },
    "file_size": 2453525388,
    "gene_list_for": [],
    "href": "/tabular-files/IGVFFI5466PMIB/@@download/IGVFFI5466PMIB.vcf.gz",
    "input_file_for": [],
    "integrated_in": [
        {
            "@id": "/construct-library-sets/IGVFDS9002DRHP/",
            "file_set_type": "reporter library",
            "status": "released",
            "summary": "reporter library targeting random selections genome-wide"
        }
    ],
    "lab": {
        "@id": "/labs/tim-reddy/",
        "title": "Tim Reddy, Duke"
    },
    "loci_list_for": [],
    "md5sum": "9dea5438c0363c1526a6a6e03682742f",
    "quality_metrics": [],
    "release_timestamp": "2025-04-09T16:43:00.789521+00:00",
    "s3_uri": "s3://igvf-files/2025/02/24/c2aa2e2f-4e47-4f21-90f8-c856c341f38e/IGVFFI5466PMIB.vcf.gz",
    "schema_version": "15",
    "status": "released",
    "submitted_by": {
        "@id": "/users/29f5f78d-ac90-421e-90c6-a90e1dc407a7/",
        "title": "Alejandro Barrera"
    },
    "submitted_file_name": "/data/reddylab/Alex/IGVF/data_submissions/reference_data/AIM_1_STARR_seq/variants.1000G.pool17.fixed.vcf.gz",
    "summary": "GRCh38 variants",
    "upload_status": "validated",
    "uuid": "c2aa2e2f-4e47-4f21-90f8-c856c341f38e",
    "workflow": {
        "@id": "/workflows/IGVFWF6957ZNII/",
        "name": "SUPERSTARR Pipeline",
        "uniform_pipeline": false
    }
}