IGVFFI5042DAMZ

released
validated
{
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    "accession": "IGVFFI5042DAMZ",
    "aliases": [
        "buenrostro-bernstein:IGVFDS2500WRRQ_fragments"
    ],
    "analysis_step_version": "/analysis-step-versions/39c0498d-91f6-42de-8896-2fab1403f032/",
    "assay_titles": [
        "SHARE-seq"
    ],
    "assembly": "GRCm39",
    "audit": {},
    "award": {
        "@id": "/awards/HG011986/",
        "component": "mapping"
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    "barcode_map_for": [],
    "checkfiles_version": "v20",
    "content_md5sum": "a3562c40765cef35f85b5c55fb22d786",
    "content_type": "fragments",
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    "creation_timestamp": "2025-03-27T01:18:39.609003+00:00",
    "derived_from": [
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                    {
                        "@id": "/sample-terms/UBERON_0000955/",
                        "status": "released",
                        "term_name": "brain"
                    }
                ],
                "status": "released",
                "summary": "Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)",
                "taxa": "Mus musculus"
            }
        ],
        "status": "released",
        "summary": "single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)"
    },
    "file_size": 1358161722,
    "filtered": false,
    "gene_list_for": [],
    "href": "/tabular-files/IGVFFI5042DAMZ/@@download/IGVFFI5042DAMZ.bed.gz",
    "input_file_for": [
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    "integrated_in": [],
    "lab": {
        "@id": "/labs/jason-buenrostro/",
        "title": "Jason Buenrostro, Broad"
    },
    "loci_list_for": [],
    "md5sum": "7ccafa48438aa05cc57dfdb209e7fb62",
    "primer_design_for": [],
    "quality_metrics": [
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    "release_timestamp": "2025-05-07T20:35:07.497236+00:00",
    "s3_uri": "s3://igvf-files/2025/03/27/84936cbd-88bc-434f-a4d3-a5c01d6f43c0/IGVFFI5042DAMZ.bed.gz",
    "schema_version": "15",
    "status": "released",
    "submitted_by": {
        "@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
        "title": "Siddarth Wekhande"
    },
    "submitted_file_name": "gs://fc-9649faf8-a4ec-4ca4-a975-498a1707d03c/submissions/1d455597-b132-452b-8b75-bf2db8c76d2e/single_cell_pipeline/37c6f33e-77c3-4424-9360-fe4be37474a2/call-atac/wf_atac/7a2fe1c0-7261-4735-aaa4-246d3f946892/call-generate_fragments/SS-PKR-433.fragments.tsv.gz",
    "summary": "GRCm39 unfiltered fragments",
    "upload_status": "validated",
    "uuid": "84936cbd-88bc-434f-a4d3-a5c01d6f43c0",
    "workflow": {
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}