IGVFFI4526HCTX

released
validated
File Set
IGVFDS2018URDY(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
cell hashing barcodes
Analysis Step Version
File Format
tsv
Content Type
cell hashing barcodes
Aliases
ansuman-satpathy:igvf10_multiseq_count_matrix_10x2
md5sum
bb066a0a9e9449c73d3cb453330a0655
Content MD5sum
15f3dbbbc9b48e5379b85a91e893e493
File Size
883 KB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/multi_tsvs/e10l2_tag_mtx.tsv.gz
Checkfiles Version

File Format Specifications

1 item
Page
Description
Type
Download
Preview

Samples

2 items
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
MultiplexedSample
multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples

Files This File Derives From

8 items
fastq
reads
Ansuman Satpathy, Stanford
163 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.2 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
203 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
547 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
155 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.2 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
216 MB
validated
fastq
reads
Ansuman Satpathy, Stanford
516 MB
validated

Attribution