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IGVFFI4279WJVY

released
validated
File Set
IGVFDS5278IBSB(SHARE-seq: fragments, sparse gene count matrix)
Summary
GRCh38 fragments
File Format
tsv
Content Type
fragments
Aliases
buenrostro-bernstein:human-bone-marrow-tabular-file
md5sum
329a19064fa2d2042bafeaaba697ec41
Content MD5sum
65d30628e7729634bd7ae6ab4c5951d1
File Size
13 GB
Submitted File Name
gs://fc-2fd49c3d-1a21-4533-b924-a897190ea827/human_BMMC/merged.fragments.tsv.gz
Checkfiles Version
Legacy version of checkfiles

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

1 item
Page
Description
Type
Download
Preview
Specification of fragment file generated by https://github.com/masai1116/SHARE-seq-alignmentV2
file format specification

Samples

49 items
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), female, Homo sapiens (19 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (26 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (49 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), female, Homo sapiens (19 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (49 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (26 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (29 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (37 years)
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (26 years)

Files This File Derives From

772 items
fastq
reads
Jason Buenrostro, Broad
696 MB
validated
fastq
reads
Jason Buenrostro, Broad
14 KB
validated
fastq
reads
Jason Buenrostro, Broad
760 MB
validated
fastq
reads
Jason Buenrostro, Broad
907 MB
validated
fastq
reads
Jason Buenrostro, Broad
6.0 KB
validated
fastq
reads
Jason Buenrostro, Broad
5.0 KB
validated
fastq
reads
Jason Buenrostro, Broad
19 KB
validated
fastq
reads
Jason Buenrostro, Broad
493 MB
validated
fastq
reads
Jason Buenrostro, Broad
1.4 KB
validated
fastq
reads
Jason Buenrostro, Broad
463 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad