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IGVFFI4235BPMB

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4340KVZI(single-nucleus ATAC-seq (10x multiome), single-nucleus RNA sequencing assay (10x multiome))
Summary
fragments
Analysis Step Version
/analysis-step-versions/e904b252-f348-4c6d-835c-5ae6bf91b9a0/
File Format
tsv
Content Type
fragments
Aliases
harinder-singh:Bcells_don1_pitt_multiome_day012_atac_fragments
md5sum
55db4df2dee67fc5dc7f2d2817fb5a1e
Content MD5sum
28ecb4bd894a0a24a775b17c818d75e5
File Size
1.8 GB
Submitted File Name
/ix/djishnu/Common_Folder/Jingyu_Data/multiome_1st_donor_UPMC_day0_2/outs/atac_fragments.tsv.gz
Checkfiles Version
v20
Attribution
Harinder Singh, University of Pittsburgh

File Format Specifications

1 item
Page
Description
Type
Download
Standardized File Format
Preview
Format specification for atac_fragments.csv files derived from cellranger arc
file format specification

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days

Files This File Derives From

24 items
fastq
reads
Harinder Singh, University of Pittsburgh
379 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
2.3 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
4.2 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
914 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
385 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
4.1 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
2.3 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
1.2 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
1.2 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
909 MB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
hdf5
filtered feature barcode matrix
cell by gene expression by peak in filtered feature barcode matrix
Harinder Singh, University of Pittsburgh
514 MB
validated