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IGVFFI4223UWJR

released
validated
File Set
IGVFDS2622CKLA(MPRA integrating a reporter library targeting accessible genome regions in many genomic loci)
Summary
element quantifications
Analysis Step Version
/analysis-step-versions/0969d738-dcb7-48f3-b525-14ec0029d630/
File Format
tsv
Content Type
element quantifications
Aliases
jay-shendure:tabularfile_CREs_bulkMPRA-counts_withcoords_LaLanne
md5sum
61acab16049d2083ef42d2c0ed5eb627
Content MD5sum
a0ca41cd1a892b4c8315b292edb246e4
File Size
17 MB
Submitted File Name
/net/shendure/vol8/projects/JBL/GEO_scATAC_EB_correction_nobackup/bulk_MPRA_counts_mEB_series_w_mm39_coord_20241119.tsv.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jay Shendure, UW

File Format Specifications

1 item
Page
Description
Type
Download
Standardized File Format
Preview
File format specifications for table of bulk MPRA counts
file format specification

Samples

38 items
Sample Terms
Summary
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 8 days transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 6 days transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 12 days transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 20 days transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 18 days transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 20 days transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 12 days transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 12 days transfected with a reporter library

Files This File Derives From

242 items
fastq
reads
Jay Shendure, UW
318 MB
validated
fastq
reads
Jay Shendure, UW
391 MB
validated
fastq
reads
Jay Shendure, UW
486 MB
validated
fastq
reads
Jay Shendure, UW
131 MB
validated
fastq
reads
Jay Shendure, UW
655 MB
validated
fastq
reads
Jay Shendure, UW
307 MB
validated
fastq
reads
Jay Shendure, UW
350 MB
validated
fastq
reads
Jay Shendure, UW
395 MB
validated
fastq
reads
Jay Shendure, UW
381 MB
validated
fastq
reads
Jay Shendure, UW
340 MB
validated