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IGVFFI3993MUKU

released
validation exempted
File Set
IGVFDS1583PWNS(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
/analysis-step-versions/699d6738-4033-4afc-b6f3-1d82a80e0b41/
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf2_peaks_10x1
md5sum
6fcda58c1d69604b1d37b4623528a534
Content MD5sum
43fd873a122e81bb0717927c1b173e56
File Size
1.4 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf2/e2l1_peaks.bed
Checkfiles Version
v14
Validation Error Detail
{"md5sum": "original md5sum 43fd873a122e81bb0717927c1b173e56 does not match newly calculated md5sum 6fcda58c1d69604b1d37b4623528a534.", "validate_files": "Error [file=/home/ubuntu/igvf-files/2025/01/28/aac738c9-3874-472c-ab78-deaff323c534/IGVFFI3993MUKU.bed.gz, line=170513]: chrom KI270728.1 not found [KI270728.1\t232282\t233180]\nAborting ... found error."}
Attribution
Ansuman Satpathy, Stanford

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) TeloHAEC cell line treated with 10 ng/mL tumor necrosis factor alpha for 4 hours; Homo sapiens (female) TeloHAEC cell line; ... and 7 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
6.9 GB
validation exempted