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IGVFFI3512DUKP

released
validated
File Set
IGVFDS9739IIFE(hg19 elements)
Summary
hg19 MPRA sequence designs
File Format
tsv
Content Type
MPRA sequence designs
md5sum
4ecba7032d768a77b007cec66a09d44e
Content MD5sum
18f40c7423a3673e82d43f5a0e05df22
File Size
420 KB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/ASD_nadav/design/design_ASD_inclVariants_indelFix_headerFix_arrayFix.tsv.gz"
Checkfiles Version
Legacy version of checkfiles
Attribution
Nadav Ahituv, UCSF

Reference Source Details

Genome Assembly
hg19

File Format Specifications

1 item
Page
Description
Type
Download
Preview
IGVF MPRA Sequence Designs metadata format
file format specification

Files Derived From This File

3 items
tsv
barcode to element mapping
hg19 barcode to element mapping
Nadav Ahituv, UCSF
27 MB
validated
yaml
seqspec
seqspec of IGVFFI7550XNYO, IGVFFI3111OZMK, IGVFFI4516TPML
Nadav Ahituv, UCSF
1.4 KB
validation exempted
tsv
reporter genomic variant effects
hg19 reporter genomic variant effects
Nadav Ahituv, UCSF
121 KB
validated

Integrated In

1 item
Accession
Type
Summary
Aliases
Lab
ConstructLibrarySet
reporter library targeting histone modifications, transcription start sites genome-wide associated with autism spectrum disorder
Nadav Ahituv, UCSF