IGVFFI3512DUKP

released

validated

File Set

IGVFDS9739IIFE(GRCh38 elements)

Summary

GRCh38 MPRA sequence designs

File Format

tsv

Content Type

MPRA sequence designs

md5sum

4ecba7032d768a77b007cec66a09d44e

Content MD5sum

18f40c7423a3673e82d43f5a0e05df22

File Size

420 KB

Submitted File Name

"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/ASD_nadav/design/design_ASD_inclVariants_indelFix_headerFix_arrayFix.tsv.gz"

Reference Source Details

Genome Assembly

GRCh38

File Format Specifications

1 item

Page

Description

Type

Download

Preview

IGVF MPRA Sequence Designs metadata format

file format specification

IGVF_MPRA_metadata_format.pdf

Files Derived From This File

2 items

tsv

barcode to element mapping

barcode to element mapping

Nadav Ahituv, UCSF

27 MB

validated

yaml

seqspec

seqspec of IGVFFI7550XNYO, IGVFFI3111OZMK, IGVFFI4516TPML

Nadav Ahituv, UCSF

1.4 KB

validated

Integrated In

1 item

Accession

Type

Summary

Aliases

Lab

ConstructLibrarySet

reporter library targeting histone modifications, transcription start sites genome-wide associated with autism spectrum disorder

Nadav Ahituv, UCSF

Attribution

Award

Principal Investigator(s)

Jay Shendure, Nadav Ahituv, Martin Kircher

Contact P.I.

Lab

Nadav Ahituv, UCSF