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IGVFFI2041KXFD

released
validated
File Set
IGVFDS9607HTSX(GRCh38 elements)
Summary
GRCh38 MPRA sequence designs
File Format
tsv
Content Type
MPRA sequence designs
md5sum
ca4f3d660dfcee1afd99c766d888ac80
Content MD5sum
b8f4cc20c3a277a034059ed25eba1d2c
File Size
14 MB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/ag-kircher/IGVF_data_submssion_TM/proximalPromotor/design/proreg_meta_data.tsv.gz"
Checkfiles Version
Legacy version of checkfiles
Attribution
Nadav Ahituv, UCSF

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

1 item
Page
Description
Type
Download
Preview
IGVF MPRA Sequence Designs metadata format
file format specification

Files Derived From This File

2 items
tsv
barcode to element mapping
GRCh38 barcode to element mapping
Nadav Ahituv, UCSF
728 MB
validated
yaml
seqspec
seqspec of IGVFFI7003XVUG, IGVFFI5231ATBS, IGVFFI0921LXBF, IGVFFI8640LLIG, IGVFFI0576IRDC, IGVFFI6354NJGB, IGVFFI4403ENTR, IGVFFI2142OYFW, IGVFFI6807PKQA
Nadav Ahituv, UCSF
1.8 KB
validation exempted

Integrated In

1 item
Accession
Type
Summary
Aliases
Lab
ConstructLibrarySet
reporter library targeting candidate cis-regulatory elements genome-wide
Nadav Ahituv, UCSF