IGVFFI1739UIIK

released

validation exempted

File Set

IGVFDS0398ALPE(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)

Summary

fragments

Analysis Step Version

/analysis-step-versions/4e4a3f0b-c3bc-477c-bc53-c3091bc56756/

File Format

tsv

Content Type

fragments

Aliases

ansuman-satpathy:igvf17_fragments_10x5

md5sum

536bbcfe7f31cdd239bda5c5bb48e764

Content MD5sum

792f905c0ea76e9c32f893b96b0a9a68

File Size

4.8 GB

Submitted File Name

/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf17/e17l5_fragments.tsv.gz

Checkfiles Version

v14

Validation Error Detail

{"tabular_file_error": {"schema": null, "error_number_limit": 1000, "number_of_errors": 1000, "extra-cell": {"count": 1000, "description": "This row has more values compared to the header row (the first row in the data source). A key concept is that all the rows in tabular data must have the same number of columns.", "details": [{"row_number": 52, "field_number": 2, "note": ""}, {"row_number": 52, "field_number": 3, "note": ""}]}, "error_types": ["extra-cell"]}}

File Format Specifications

1 item

Page

Description

Type

Download

Preview

10X Genomics Fragment File

file format specification

header_fragment_files_from_10x_genomics_20241120.tsv

Samples

5 items

Sample Terms

Disease Terms

Summary

IGVFSM0198VBOA

MultiplexedSample

RUES2

multiplexed sample: RUES2 differentiated cell specimen induced to gastrula for 2 days, female, Homo sapiens; RUES2 differentiated cell specimen induced to gastrula for 1 day, female, Homo sapiens; ... and 10 more samples

MultiplexedSample

MultiplexedSample

MultiplexedSample

MultiplexedSample