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IGVFFI0929WRXO

released
validated
File Set
IGVFDS2774OLAH(MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci)
Summary
element quantifications
Analysis Step Version
/analysis-step-versions/199d0820-eeaa-41d6-87ad-a151a8e62da5/
File Format
tsv
Content Type
element quantifications
Aliases
jay-shendure:tabularfile_CREs_scQers-processed_withcoords_LaLanne
md5sum
47cb02d474f69f08273d274504725a1d
Content MD5sum
2b4422147e889884c7dc60fa9c08ea2e
File Size
23 MB
Submitted File Name
/net/shendure/vol8/projects/JBL/GEO_scATAC_EB_correction_nobackup/assigned_oBC_CRE_mBC_joined_counts_sc_rep_mEB_series_w_mm39_coord_20241119.tsv.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jay Shendure, UW

File Format Specifications

1 item
Page
Description
Type
Download
Standardized File Format
Preview
File format specifications for table of processed scQer counts
file format specification

Samples

6 items
Sample Terms
Summary
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10Xlane1) transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10Xlane2) transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10Xlane1) transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10Xlane2) transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10Xlane2) transfected with a reporter library
InVitroSystem
Mus musculus WD44 (male) mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10Xlane1) transfected with a reporter library

Files This File Derives From

68 items
fastq
reads
Jay Shendure, UW
217 MB
validated
fastq
reads
Jay Shendure, UW
1.2 GB
validated
fastq
reads
Jay Shendure, UW
585 MB
validated
fastq
reads
Jay Shendure, UW
314 MB
validated
fastq
reads
Jay Shendure, UW
1.2 GB
validated
fastq
reads
Jay Shendure, UW
791 MB
validated
fastq
reads
Jay Shendure, UW
937 MB
validated
fastq
reads
Jay Shendure, UW
1.2 GB
validated
fastq
reads
Jay Shendure, UW
1.9 GB
validated
fastq
reads
Jay Shendure, UW
2.4 GB
validated